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The Quest for Ortho...
The Quest for Orthologs orthology benchmark service in 2022
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Nevers, Yannis (author)
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Jones, Tamsin E. M. (author)
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Jyothi, Dushyanth (author)
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Yates, Bethan (author)
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Ferret, Meritxell (author)
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Portell-Silva, Laura (author)
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Codo, Laia (author)
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Cosentino, Salvatore (author)
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Marcet-Houben, Marina (author)
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Vlasova, Anna (author)
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Poidevin, Laetitia (author)
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Kress, Arnaud (author)
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Hickman, Mark (author)
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- Persson, Emma, 1991- (author)
- Stockholms universitet,Institutionen för biokemi och biofysik,Science for Life Laboratory (SciLifeLab)
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Piližota, Ivana (author)
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Guijarro-Clarke, Cristina (author)
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Iwasaki, Wataru (author)
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Lecompte, Odile (author)
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- Sonnhammer, Erik (author)
- Stockholms universitet,Institutionen för biokemi och biofysik,Science for Life Laboratory (SciLifeLab)
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Roos, David S. (author)
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Gabaldón, Toni (author)
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Thybert, David (author)
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Thomas, Paul D. (author)
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Hu, Yanhui (author)
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Emms, David M. (author)
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Bruford, Elspeth (author)
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Capella-Gutierrez, Salvador (author)
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Martin, Maria J. (author)
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Dessimoz, Christophe (author)
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Altenhoff, Adrian (author)
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(creator_code:org_t)
- 2022-05-12
- 2022
- English.
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In: Nucleic Acids Research. - : Oxford University Press (OUP). - 0305-1048 .- 1362-4962. ; 50:W1, s. W623-W632
- Related links:
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https://doi.org/10.1...
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https://urn.kb.se/re...
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https://doi.org/10.1...
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Abstract
Subject headings
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- The Orthology Benchmark Service (https://orthology.benchmarkservice.org) is the gold standard for orthology inference evaluation, supported and maintained by the Quest for Orthologs consortium. It is an essential resource to compare existing and new methods of orthology inference (the bedrock for many comparative genomics and phylogenetic analysis) over a standard dataset and through common procedures. The Quest for Orthologs Consortium is dedicated to maintaining the resource up to date, through regular updates of the Reference Proteomes and increasingly accessible data through the OpenEBench platform. For this update, we have added a new benchmark based on curated orthology assertion from the Vertebrate Gene Nomenclature Committee, and provided an example meta-analysis of the public predictions present on the platform.
Subject headings
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
Publication and Content Type
- ref (subject category)
- art (subject category)
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- By the author/editor
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Nevers, Yannis
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Jones, Tamsin E. ...
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Jyothi, Dushyant ...
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Yates, Bethan
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Ferret, Meritxel ...
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Portell-Silva, L ...
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show more...
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Codo, Laia
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Cosentino, Salva ...
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Marcet-Houben, M ...
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Vlasova, Anna
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Poidevin, Laetit ...
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Kress, Arnaud
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Hickman, Mark
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Persson, Emma, 1 ...
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Piližota, Ivana
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Guijarro-Clarke, ...
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Iwasaki, Wataru
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Lecompte, Odile
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Sonnhammer, Erik
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Roos, David S.
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Gabaldón, Toni
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Thybert, David
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Thomas, Paul D.
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Hu, Yanhui
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Emms, David M.
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Bruford, Elspeth
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Capella-Gutierre ...
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Martin, Maria J.
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Dessimoz, Christ ...
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Altenhoff, Adria ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
- Articles in the publication
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Nucleic Acids Re ...
- By the university
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Stockholm University